## Chapter 2

- Section 2.4: could not do figures 2.4-2.6, because the file "nypdstops2.csv" for the police stop example is not on the website
- Section 2.6: missing graphs for this section


## Chapter 4

- Section 4.3: plot 4.2
- Section 4.4: Log-base-10 model on page 61: the outputs are a bit different (slightly different sample size: 1187 from book,
               while I have 1192 as in the other regressions)
- Section 4.5: no data for figure 4.5
- Section 4.7 graph: I fixed the typos in the code and it seems to work (just could't get the axis scale to be the same)

## Chapter 5

- do you want to include code for plots like 5.2, 5.3, 5.5, 5.6?

## Chapter 6

- Section 6.2: data is not on the website (missing nypdstops2.csv file); besides that, all is typed in, except graph
               commands, just need to check if all works once the data is in.
- Section 6.5: Storable votes example: cannot figure out what was done with the data from what is available on the website;
               besides that, all is typed in, except graph commands, just need to check if all works once the data is in
               Missing figures 6.3, 6.4, 6.5
- Section 6.7: slightly different intercepts in the regressionn (pg. 126); 
               fit1.a: book n=1374, mine n=1379
               fit1.b: book n=1187, mine n=1192 
- Section 6.8: figure 6.6, 6.7

## Chapter 7

- Section 7.3: - maybe put all ".asc" files into one zip file so it is easier to download?
               - Check the code for "predictive sim. for a nonlinear...", since I've changed it because of NaN on y.tilde
               - "Implementation using functions" doesn't work

- Section 7.4: from "Compund models" onwards (page 150-151), doesn't seem to work well because cannot replicate
               the graphs

## Chapter 8

- Section 8.2: data is not on the website (final exam scores from midterm); besides that, all is typed in, just need to check
               if all works once the data is in.
- Section 8.3: for the roach example, the variables in the data file all have 282 obs (vs. 284 in the book), except
               for the exposure2 variable, which has 284, so the model does't run.

## Chapter 9

- Section 9.5: Graphs 9.10-9.11

## Chapter 10

- Section 10.1: Graphs 10.3-10.5: (birth weight) data not on website
- Section 10.3: (birth weight) data is not on the website; besides that, all is typed in, except graph
                commands, just need to check if all works once the data is in.
- Section 10.4: ideology data is not on the website (?); besides that, all is typed in, except graph
                commands, just need to check if all works once the data is in.

## Chapter 11

- Section 11.3: could not figure out which data to use from the files on the website; besides that, all is typed in, 
                except graph commands, just need to check if all works once the data is in.

## Chapter 12

- Section 12.2: plot figure 12.1 looks a bit different
- Section 12.6: the y-axis range of plot on Figure 12.6 does not match that on the book
- Section 12.8: could not identify the election data being used with the setup file (besides that, all is typed in,
                just need to check if all works once the data is in)

## Chapter 13

- Section 13.1: plots 13.1 & 13.2(a) looks very similar but not identical to the one in the book
- Section 13.4: figure 13.3 (sim fcn doesn't run, but BUGS version does); 
                figures 13.4 and 13.7 look different from the book 

- Section 13.5: figure 13.10 earnings example (check lmer specification because some numbers don't match those
                described in the book; also, BUGS code for the graph doesn't run
                figure 13.12: couldn't find latin square data


## Chapter 14

- Section 14.1: Figure 14.1: in the code you sent me, the model called to plot this is "all.3.sim", which is not in the code nor in the
                book (or website). From the text I suppose it should be from "M2.bugs" in the code for this section. The intervals in
                the figure look wider than those in the book.
                Figure 14.2: the figures I've done look a bit different from the ones in the book. In the book you say you
                use M3.bugs, but from the codes available, it looks like M2.bugs, which is the one I've used; also, the Bugs
                code for M3 on the website does not run.
                Figure 14.3: in the code you sent me, again it makes use of "all.3.sim". The estimates and 50% interval looks similar but the
                black line doesn't (also, on the code you use g.state, etc, which I suppose are the a.state etc on M2.bugs code)
                Figure 14.5 and 14.6: in the code you sent me, you call a model "all.est", which I suppose is the lmer model on page 303?? "demographics.weighted"
                and "raw.weighted", are the complete and no pooling models?

- Section 14.2: Figure 14.7-14.12

- Section 14.3: Figure 14.14


## Chapter 15 (there are no R codes in this chapter, just plots from commented models)

- Section 15.1: cannot estimate the police stops model because the data file "nypdstops2.csv" is not on the website
- Section 15.2: cannot figure out what was done with the data from what is available on the website (storable votes data)
- Section 15.3: cannot estimate the police stops model because the "social networks" data file is not on the website


## Chapter 16

- Section 16.4: figure 16.3
- Section 16.6: don't forget to change the y.squiggle for y.tilde in the radon.2a.bug file. 
                I added some things to the R code so that the Bugs code would run: defined u, becaused it was part of the model
                in the radon.2a.bug file; redefined "radon.inits" to include g.0 & g.1 (that were also in the Bugs code);
                for the "Prediction using R part, I also modified "radon.parameters" to include g.0 & g.1 in order for
                a.tilde & y.tilde to work, so that need to be checked (but it looks fine).

## Chapter 17

- Section 17.2: check to see if the Bugs code for the scaled inverse-Wishart model is specified correctly
                check to see if the Bugs code for the multiple group-level predictors model is specified correctly
                the Bugs code for the model "simplest varying intercept, varying slope" with uranium as a group level predictor
                works (wich is the radon.4a.bug file, also in the 17.2_Bugs_codes.bug file). Ckeck the others? If so, I need to 
                construct the matrices X and U, and now some variables that would be in there.
 
- Section 17.3: created an R file to run the flight simulator example Bugs code (seems to run properly)
- Section 17.4: created an R file to run the election example Bugs code (seems to run properly)
- Section 17.5: Bugs code is typed in but cannot run it because the data file "nypdstops2.csv" is not on the website
- Section 17.6: Bugs code is typed in but cannot run it because the storable votes data file is not on the website
                typo?: shouldn't it be "big Z" and not "little z" on line 10 of the Bugs code on page 383?
- Section 17.7: check to see if the Bugs codes for this  section are specified correctly


## Chapter 18

- Section 18.2: figures 18.1-18.3
- Section 18.3: figures 18.5-18.6 - check if code is correct (they look similar to the ones in the book)
- Section 18.4: figures 18.7
- Section 18.6: figures 18.9
- Section 18.7: data file for social networks is not on the website, so cannot run the code for this section (but all is typed in)
             

## Chapter 19

- Section 19.4: figure 19.2 looks a bit different (it might be because the codes call the parameters "mu.adj" and "eta.adj", and 
                in the figure of the book it seems to be from the model without the redundant parametrization, since the plot there 
                displays "mu" and "eta") ; did R code to run the flight simulator & the election example
- Section 19.5: is there a typo in the item response theory Bugs code (pg 426)?: in the for loop for k in 1:K (line 16), "b.hat.raw"
                and "d.raw" are indexed by j. Shouldn't it be k?
                created an R file to run the Bugs code for one of the examples in the section (the flight simulator example; seems to
                run properly)                               
- Section 19.6: graphs (figures 19.3 & 19.4)


## Chapter 20

- Section 20.1: plots 20.1 & 20.2
- Section 20.4: plots 20.4
- Section 20.5: plots 20.5 c and d (check a and b) & 20.6

## Chapter 21

- Section 21.2: figure 21.1
                Bugs code page 460: is there a typo on line3: should it be u[j] instead of u[2]?
- Section 21.3: missing "Advanced Placement" data to run Bugs code pg. 464
                figure 21.2 & 21.3
- Section 21.4: figure 21.4, 21.5, 21.6 & 21.7
- Section 21.6: created an R file to run the Bugs code (seems to run properly?) ; missing figure 21.8
- Section 21.8: Bugs code typed in, but did not run it (did not find the electromagnetic example data)
                figures 21.10 & 21.11

## Chapter 22

- Section 22.3: the data for figure 22.2 is not on the website; cannot do figure 22.3-22.8 (22.7-22.8 also, the latin square data
                is not on the website). If I have one file with how to do this anova plots, I can try to do the others
- Section 22.4: created an R file to run the Bugs code of the examples in the section 

## Chapter 23

- Section 23.1: created an R file to run the Bugs code of the examples in the section ; 
                check if R file for the electric company Bugs code example is correct (figures 23.1 & 23.2 look fine)
- Section 23.2: data for figure 23.3 not on the website
- Section 23.3: Bugs code typed in, but Progresa data not on the website
- Section 23.4: created an R file to run the Bugs code of the sesame street example (pg. 510)
                missing Figure 23.4


## Chapter 24

- Section 24.2: Bugs code for the dogs example doesn't run (I think I imported the data correctly). So I could't chek it (or
                the R codes)
                Figure 24.2, 24.3, 24.4

## Chapter 25

- Section 25.6: figure 25.3
